{
    "componentChunkName": "component---src-templates-article-page-js",
    "path": "/journals/biology/micropub-biology-002360",
    "result": {"data":{"article":{"manuscript":{"id":"25173ca3-0b64-494e-9b1a-d8de55ed0cfe","submissionTypes":["new finding"],"citations":[],"doi":"10.17912/micropub.biology.002360","dbReferenceId":"WBPaper00070205","pmcId":"","pmId":"","proteopedia":"","reviewPanel":"","species":["c. elegans"],"integrations":[],"corrections":null,"history":{"received":"2026-08-19T20:04:52.278Z","revisionReceived":"2026-09-25T22:37:39.841Z","accepted":"2026-09-26T22:55:05.902Z","published":"2026-09-29T00:34:11.875Z","indexed":"2026-10-13T00:34:11.875Z"},"versions":[{"id":"37de068a-807a-435b-8951-343d49951a0c","decision":"revise","abstract":"<p>Sex-specific differences can influence aging and disease onset. Using the simple model organism <i>Caenorhabditis elegans</i>, we previously found that hermaphroditic nematodes can activate a robust mitochondrial unfolded protein response (UPR<sup>mt</sup>) in the intestines, while female nematodes cannot. We hypothesized that the accumulation of vitellogenins in the intestines of female nematodes may be suppressing the UPR<sup>mt</sup>. Loss of vitellogenins via RNAi enhanced the UPR<sup>mt</sup> in hermaphrodites but had no impact on the UPR<sup>mt</sup> of females unless a combination of vitellogenins was simultaneously knocked down. Furthermore, combinatorial loss of vitellogenins did not restore the female UPR<sup>mt</sup> to hermaphroditic levels. We conclude that additional factors besides vitellogenin content are involved in suppressing the intestinal UPR<sup>mt </sup>in female nematodes.</p>","acknowledgements":"<p>We thank the <i>Caenorhabditis</i> Genetics Center (CGC), which is funded by the NIH Office of Research Infrastructure Programs (P40 OD010440).</p>","authors":[{"affiliations":["University of Maine"],"departments":["Molecular and Biomedical Sciences"],"credit":["dataCuration","methodology","validation","writing_originalDraft","formalAnalysis"],"email":"nathaniel.a.jordan@maine.edu","firstName":"Nathanial A.","lastName":"Jordan","submittingAuthor":false,"correspondingAuthor":false,"equalContribution":false,"WBId":null,"orcid":null},{"affiliations":["University of Maine"],"departments":["Molecular and Biomedical Sciences"],"credit":["conceptualization","fundingAcquisition","supervision","writing_reviewEditing"],"email":"suzanne.angeli@maine.edu","firstName":"Suzanne","lastName":"Angeli","submittingAuthor":true,"correspondingAuthor":true,"equalContribution":false,"WBId":null,"orcid":null}],"awards":[{"awardId":"5P20GM144265 - 03 ","funderName":"National Institute of General Medical Sciences (United States)","awardRecipient":"Suzanne Angeli"}],"conflictsOfInterest":"<p>The authors declare that there are no conflicts of interest present.</p>","dataTable":{"url":null},"extendedData":[],"funding":"<p>NIGMS COBRE Research Pilot Project Subaward 5P20GM144265 - 03 and the UMaine Institute of Medicine.</p>","image":{"url":"https://portal.micropublication.org/uploads/d6b2a6ea0e651800efdd64682967f9f4.png"},"imageCaption":"<p>&nbsp;<i>A-D</i>. Quantification of GFP intensity from <i>phsp-6</i>::GFP or <i>fem-1</i>(<i>hc17</i>); p<i>hsp-6</i>::GFP nematodes. For single vitellogenin gene knockdown, nematodes were developed on either control vector (CV) RNAi or <i>vit-1</i> (<i>A</i>), <i>vit-3</i> (<i>B</i>), or <i>vit-5</i> (<i>C</i>) RNAi at 25°C. At the young adult stage, control worms were shifted to 2o°C and onto RNAi plates seeded with CV or CV/<i>atp-3</i> (50%/50% RNAi mixture). Vitellogenin RNAi treated worms were shifted onto RNAi plates seeded with the indicated CV/<i>vit</i> RNAi or <i>vit</i>/<i>atp-3 </i>(50%/50% RNAi mixture). For the combinatorial vitellogenin gene knockdown (<i>D</i>), nematodes were developed on either control vector (CV) RNAi or <i>vit-1</i>, <i>vit-3</i>, <i>vit-5</i> (33%/33%/33% mixture) RNAi at 25°C. At the young adult stage, vitellogenin RNAi treated worms were shifted to 2o°C and onto RNAi plates seeded with the CV/<i>vit-1,3,5</i> RNAi (50%/50% combinatorial RNAi mixture) or <i>vit-1,3,5</i>/<i>atp-3 </i>(50% combinatorial mixture/50% <i>atp-3</i> RNAi). Error bars represent ± SEM. ***<i>p ≤ </i>0.001, **<i>p≤ </i>0.01, and *<i>p≤ </i>0.05.</p>","imageTitle":"<p>Impact of vitellogenin RNAi on the UPR<sup>mt</sup></p>","methods":"<p><b>Strains.</b> Bristol N2 (wild&nbsp;type) nematodes were obtained from the&nbsp;<i>Caenorhabditis</i>&nbsp;Genetics Center (CGC, University of Minnesota) and cultured using standard conditions (Sulston J 1988). The following strains were used: GL347 (SJ4100 p<i>hsp-6</i>::GFP backcrossed 6× to N2) and GL364 (<i>fem-1</i>(<i>hc17</i>); p<i>hsp-6</i>::GFP).</p><p><b>Nematode and bacterial culture conditions. </b>Nematodes were maintained on nematode growth medium (NGM) plates. NGM plates were seeded with&nbsp;<i>Escherichia coli</i>&nbsp;OP50 obtained from CGC that was grown in LB at 37°C for 18&nbsp;hours shaking at 225&nbsp;rpm. Seeded&nbsp;plates were dried for 48&nbsp;hours at room temperature before use. For RNAi experiments, HT115 (DE3) bacteria obtained from the Horizon Biosciences RNAi library were used. All RNAi clones were verified via sequencing. RNAi plates were prepared by cooling NGM to 55°C and supplementing with a final concentration of 50μg/ml carbenicillin and 1&nbsp;mM isopropyl β-d-1-thiogalactopyranoside (IPTG). RNAi bacteria were inoculated with one colony of RNAi bacteria into LB with 50μg/ml carbenicillin and were grown shaking overnight for 18&nbsp;hours at 37° at 225&nbsp;rpm. RNAi cultures were seeded on RNAi plates and allowed to grow for 48&nbsp;hours at room temperature. Plates were stored at 4&nbsp;°C for no longer than 2&nbsp;weeks.</p><p><b>Microscopy.</b> Nematodes were anesthetized with 2&nbsp;-5mM levamisole and mounted on 2% agarose pads on glass slides. Fluorescence micrographs of GFP were taken using a Zeiss Axioscope 5 fluorescent compound microscope equipped with Zen microscopy imaging program. GFP expression was enhanced using the brightness/contrast tool in Adobe Photoshop. The same parameters were used for all images. GFP intensity of nematodes was quantified using ImageJ 1.54G. The “integrated density” of GFP expression and length of nematodes was measured using ImageJ tools. Integrated density value was normalized by number of nematodes and average length of nematodes. The final value is in arbitrary units.</p><p><b>Statistics. </b>Significance between control and experimental groups was determined by using a two-tailed Student’s&nbsp;<i>t</i>-test. Asterisks denote corresponding statistical significance: *<i>p &lt; </i>0.05; **<i>p</i> &lt; 0.01; ***<i>p</i> &lt; 0.001. Error bars were generated using the standard error of the mean (SEM), typically from three or more&nbsp;pooled biological replicates.</p>","reagents":"<p></p>","patternDescription":"<p>Age-related diseases, such as cardiovascular disease, cancer, and neurodegenerative syndromes can display sex-specific differences. Since mitochondrial dysfunction is central to most age-related diseases, we examine the mitochondrial unfolded protein response (UPR<sup>mt</sup>), a conserved, broad-range transcriptional response that, among other functions, aids in the refolding of mitochondrial matrix proteins (Kim, Ramalho, and Haynes 2024). In <i>C. elegans</i>, UPR<sup>mt</sup> activation is largely localized to the intestine, the major metabolic tissue in the nematode. In addition to digestion, the intestine also carries out many functions similar to the liver, such as detoxification, immunity, and fat metabolism (Dimov and Maduro 2019). We and others recently discovered that the activation of the intestinal UPR<sup>mt</sup> depends on the function of another tissue: the germline (Foulger et al. 2025; Charmpilas et al. 2024; Shen et al. 2024; Zhou et al. 2024)<sup>.</sup> Specifically, we found that adult nematodes with actively proliferating germlines, such as hermaphrodites or mated females, can activate a robust UPR<sup>mt</sup> in the intestines when challenged with either a high dose of the metal manganese (Mn) or RNAi of the OSCP/<i>atp-3</i> subunit of complex V (Foulger et al. 2025). Conversely, adult nematodes with mutations that lead to a lack germline stem cells or lack of sperm, such <i>glp-1</i> or <i>fem-1</i> mutants, cannot activate the intestinal UPR<sup>mt</sup>. Additionally, we found that loss of the transcription factor FOXO/<i>daf-16</i> fully restored the UPR<sup>mt</sup> in <i>fem-1</i> mutants (Foulger et al. 2025). Here, we probe whether vitellogenesis, which occurs in the intestines and is dependent on FOXO/<i>daf-16</i>, impacts the UPR<sup>mt</sup>.</p><p>Vitellogenins are precursor yolk proteins that provide nutrients to developing embryos. In <i>C. elegans, </i>the highly conserved genes <i>vit-1 </i>through <i>vit-6 </i>are responsible for encoding these proteins (Perez and Lehner 2019). In hermaphrodites, they are synthesized in the intestines and transported into the pseudocoelom and to maturing oocytes (Perez and Lehner 2019). Young adult <i>fem-1</i> mutants display elevated yolk content compared to wild-type hermaphrodites at Day 1 of adulthood (DePina et al. 2011), presumably due to a lack of vitellogenin transport out of the intestines to maturing oocytes. We used RNAi to knockdown<i> vit-1</i>, <i>vit-3</i>, <i>vit-5</i>, or all three genes simultaneously (<i>vit-1,3,5</i>) and monitored intestinal activation of the UPR<sup>mt</sup> in young adult nematodes. We used the UPR<sup>mt</sup> reporter in which the GFP expression is driven by the promoter of the mitochondrial chaperone mtHsp70/<i>hsp-6</i> (Yoneda et al. 2004). We additionally used RNAi of OSCP/<i>atp-3 </i>to induce the UPR<sup>mt</sup> in young adult nematodes as previously described (Angeli et al. 2021). We found that in hermaphroditic nematodes, knockdown of <i>vit-1</i> trended toward elevating the intestinal UPR<sup>mt</sup> (p=0.0504) and knockdown of <i>vit-3</i>, <i>vit-5</i>, or <i>vit-1,3,5 </i>all significantly elevated the UPR<sup>mt </sup>(<b>Figure 1A-1D</b>). In contrast, knockdown of<i> vit-1</i>, <i>vit-3</i>, or <i>vit-5 </i>did not significantly alter the UPR<sup>mt</sup> of <i>fem-1</i> mutants (<b>Figure 1A-1D</b>). The knockdown of <i>vit-1,3,5</i> did significantly enhance the UPR<sup>mt</sup> of the <i>fem-1</i> mutants, but not to wild-types levels (<b>Figure 1D</b>). One caveat of this study is that we were not able to procure RNAi clones for <i>vit-2</i>, <i>vit-4</i>, or <i>vit-6</i>. However, since <i>vit-2</i> is over 80% identical to <i>vit-1</i> and <i>vit-3</i>/<i>vit-4</i> are duplicated genes that are 99% identical (Perez and Lehner 2019), we would expect to observe more impact from individual RNAi knockdown on females if these vitellogenins played an outsized role on the UPR<sup>mt</sup>. The <i>vit-6</i> gene is the most divergent vitellogenin, so it remains possible that it plays an untested role in the UPR<sup>mt</sup>. Overall, while it does appear that vitellogenins can mildly suppress the adult UPR<sup>mt</sup>, especially in hermaphroditic nematodes, we conclude that additional germline-to-intestinal signals are responsible for the potent suppression of the UPR<sup>mt</sup> in female nematodes.</p>","references":[{"reference":"<p>Angeli S, Foulger A, Chamoli M, Peiris TH, Gerencser A, Shahmirzadi AA, Andersen J, Lithgow G. 2021. The mitochondrial permeability transition pore activates the mitochondrial unfolded protein response and promotes aging. eLife 10: 10.7554/elife.63453.</p>","pubmedId":"","doi":"10.7554/eLife.63453"},{"reference":"<p>Charmpilas N, Sotiriou A, Axarlis K, Tavernarakis N, Hoppe T. 2024. Reproductive regulation of the mitochondrial stress response in Caenorhabditis elegans. Cell Reports 43: 114336.</p>","pubmedId":"","doi":"10.1016/j.celrep.2024.114336"},{"reference":"<p>DePina AS, Iser WB, Park SS, Maudsley S, Wilson MA, Wolkow CA. 2011. Regulation of Caenorhabditis elegans vitellogenesis by DAF-2/IIS through separable transcriptional and posttranscriptional mechanisms. BMC Physiology 11: 10.1186/1472-6793-11-11.</p>","pubmedId":"","doi":"10.1186/1472-6793-11-11"},{"reference":"<p>Dimov I, Maduro MF. 2019. The C. elegans intestine: organogenesis, digestion, and physiology. Cell and Tissue Research 377: 383-396.</p>","pubmedId":"","doi":" 10.1007/s00441-019-03036-4"},{"reference":"<p>Foulger AC, Jordan NA, Castle A, Bhaumik D, Andersen JK, Lithgow GJ, Angeli S. 2025. Germline regulation of the intestinal mitochondrial unfolded protein response. GeroScience : 10.1007/s11357-025-01890-5.</p>","pubmedId":"","doi":"10.1007/s11357-025-01890-5"},{"reference":"<p>Kim S, Ramalho TR, Haynes CM. 2024. Regulation of proteostasis and innate immunity via mitochondria-nuclear communication. Journal of Cell Biology 223: 10.1083/jcb.202310005.</p>","pubmedId":"","doi":"10.1083/jcb.202310005"},{"reference":"<p>Perez MF, Lehner B. 2019. Vitellogenins - Yolk Gene Function and Regulation in Caenorhabditis elegans. Frontiers in Physiology 10: 10.3389/fphys.2019.01067.</p>","pubmedId":"","doi":"10.3389/fphys.2019.01067"},{"reference":"<p>Shen K, Durieux J, Mena CG, Webster BM, Tsui CK, Zhang H, et al., Dillin. 2024. The germline coordinates mitokine signaling. Cell 187: 4605-4620.e17.</p>","pubmedId":"","doi":" 10.1016/j.cell.2024.06.010"},{"reference":"<p>Sulston J, H.J., <i>Methods</i>, in <i>The Nematode Caenorhabditis elegans</i>, W.B. W., Editor. 1988, Cold Spring Harbor Laboratory Press Cold Spring Harbor. p. 587-606</p>","pubmedId":"","doi":""},{"reference":"<p>Yoneda T, Benedetti C, Urano F, Clark SG, Harding HP, Ron D. 2004. Compartment-specific perturbation of protein handling activates genes encoding mitochondrial chaperones. Journal of Cell Science 117: 4055-4066.</p>","pubmedId":"","doi":" 10.1242/jcs.01275"},{"reference":"<p>Zhou L, Jiang L, Li L, Ma C, Xia P, Ding W, Liu Y. 2024. A germline-to-soma signal triggers an age-related decline of mitochondrial stress response. Nature Communications 15: 10.1038/s41467-024-53064-0.</p>","pubmedId":"","doi":" 10.1038/s41467-024-53064-0"}],"title":"<p>Role of vitellogenins on the mitochondrial unfolded protein response</p>","reviews":[{"reviewer":{"displayName":"Mark Pellegrino"},"openAcknowledgement":false,"status":{"submitted":true}}],"curatorReviews":[{"curator":{"displayName":"Gary Craig Schindelman"},"openAcknowledgement":false,"submitted":null}]},{"id":"622bf716-597e-4d86-b109-341d96dea97f","decision":"accept","abstract":"<p>Sex-specific differences influence aging and disease onset. Using <i><a href=\"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&amp;id=6239\" id=\"fbbdd4f3-3a46-4c0a-b8ba-bfd8b4b36cda\">Caenorhabditis elegans</a></i>, we previously found that hermaphroditic nematodes activate a robust mitochondrial unfolded protein response (UPR<sup>mt</sup>) in the intestines, while female nematodes do not. We hypothesized that the accumulation of vitellogenins in females was suppressing the UPR<sup>mt</sup>. Loss of vitellogenins via RNAi enhanced the UPR<sup>mt</sup> in hermaphrodites but had no impact on the UPR<sup>mt</sup> of females unless a combination of vitellogenins was simultaneously knocked down. Furthermore, combinatorial loss of vitellogenins did not restore the female UPR<sup>mt</sup> to hermaphroditic levels. We conclude that additional factors besides vitellogenins are involved in suppressing the intestinal UPR<sup>mt </sup>in female nematodes.</p>","acknowledgements":"<p>We thank the <i>Caenorhabditis</i> Genetics Center (CGC), which is funded by the NIH Office of Research Infrastructure Programs (P40 OD010440).</p>","authors":[{"affiliations":["University of Maine"],"departments":["Molecular and Biomedical Sciences"],"credit":["dataCuration","methodology","validation","writing_originalDraft","formalAnalysis"],"email":"nathaniel.a.jordan@maine.edu","firstName":"Nathanial A.","lastName":"Jordan","submittingAuthor":false,"correspondingAuthor":false,"equalContribution":false,"WBId":null,"orcid":null},{"affiliations":["University of Maine"],"departments":["Molecular and Biomedical Sciences"],"credit":["conceptualization","fundingAcquisition","supervision","writing_reviewEditing"],"email":"suzanne.angeli@maine.edu","firstName":"Suzanne","lastName":"Angeli","submittingAuthor":true,"correspondingAuthor":true,"equalContribution":false,"WBId":null,"orcid":null}],"awards":[{"awardId":"5P20GM144265 - 03 ","funderName":"National Institute of General Medical Sciences (United States)","awardRecipient":"Suzanne Angeli"}],"conflictsOfInterest":"<p>The authors declare that there are no conflicts of interest present.</p>","dataTable":{"url":null},"extendedData":[],"funding":"<p>NIGMS COBRE Research Pilot Project Subaward 5P20GM144265 - 03 and the UMaine Institute of Medicine.</p>","image":{"url":"https://portal.micropublication.org/uploads/d6b2a6ea0e651800efdd64682967f9f4.png"},"imageCaption":"<p> <i>A-D</i>. Quantification of GFP intensity from <i>p<a href=\"http://www.wormbase.org/db/get?name=WBGene00002010;class=Gene\" id=\"2aeab6f5-9f01-4dd0-ad3d-45989f14d782\">hsp-6</a></i>::GFP or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00001411;class=Gene\" id=\"feed7c3d-4bd8-432f-8a0f-69d05b8fd813\">fem-1</a></i>(<i><a href=\"http://www.wormbase.org/db/get?name=WBVar00087750;class=Variation\" id=\"61e74894-6d51-4712-b611-4464d5226be5\">hc17</a></i>); p<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00002010;class=Gene\" id=\"10e111df-00af-4836-8b8e-e022d631f3ae\">hsp-6</a></i>::GFP nematodes. For single vitellogenin gene knockdown, nematodes were developed on either control vector (CV) RNAi or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"cb449d26-e939-423c-a650-2683cc8d0c67\">vit-1</a></i> (<i>A</i>), <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006927;class=Gene\" id=\"1ec06419-0334-4634-80a8-a3f770dc3a8b\">vit-3</a></i> (<i>B</i>), or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006929;class=Gene\" id=\"981ed71c-0fe4-4779-a6d5-b9e0eeaf68ea\">vit-5</a></i> (<i>C</i>) RNAi at 25°C. At the young adult stage, control worms were shifted to 2o°C and onto RNAi plates seeded with CV or CV/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00000230;class=Gene\" id=\"77bd446e-285f-41cf-b775-cc969b810acf\">atp-3</a></i> (50%/50% RNAi mixture). Vitellogenin RNAi treated worms were shifted to 2o°C and onto RNAi plates seeded with the indicated CV/<i>vit</i> RNAi or <i>vit</i>/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00000230;class=Gene\" id=\"0c358c1a-debf-4f38-abba-6ccbb6ae90da\">atp-3</a> </i>(50%/50% RNAi mixture). For the combinatorial vitellogenin gene knockdown (<i>D</i>), nematodes were developed on either control vector (CV) RNAi or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"4fab8e65-7a9b-4306-86fe-1502c576ec7d\">vit-1</a></i>, <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006927;class=Gene\" id=\"cee0f6c9-a2de-47cd-83b9-1b0b05cca801\">vit-3</a></i>, <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006929;class=Gene\" id=\"dc89bd60-75ca-4dc0-b548-3d3d9e16035a\">vit-5</a></i> (33%/33%/33% mixture) RNAi at 25°C. At the young adult stage, vitellogenin RNAi treated worms were shifted to 2o°C and onto RNAi plates seeded with the CV/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"9de425cd-28dc-4276-bfd3-debcbdacb1e3\">vit-1</a>,3,5</i> RNAi (50%/50% combinatorial RNAi mixture) or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"72710eee-e075-4fc5-8765-f4eff7eeb43c\">vit-1</a>,3,5</i>/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00000230;class=Gene\" id=\"1b75c2a2-9ceb-46df-ad54-5e0ea243230c\">atp-3</a> </i>(50% combinatorial mixture/50% <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00000230;class=Gene\" id=\"9ee97abe-5c3d-4258-babe-506f07cd1957\">atp-3</a></i> RNAi). Error bars represent ± SEM. ***<i>p ≤ </i>0.001, **<i>p≤ </i>0.01, and *<i>p≤ </i>0.05.</p>","imageTitle":"<p>Impact of vitellogenin RNAi on the UPR<sup>mt</sup></p>","methods":"<p><b>Strains.</b> Bristol <a href=\"http://www.wormbase.org/db/get?name=WBStrain00000001;class=Strain\" id=\"12c24628-3e0a-450f-a76a-f656479a22c8\">N2</a> (wild type) nematodes were obtained from the <i><a href=\"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&amp;id=6237\" id=\"bdf7919a-2fac-458a-828a-cd90eec0636e\">Caenorhabditis</a></i> Genetics Center (CGC, University of Minnesota) and cultured using standard conditions (Sulston J 1988). The following strains were used: <a href=\"http://www.wormbase.org/db/get?name=WBStrain00049994;class=Strain\" id=\"4dada6fb-f7b2-4f9e-a6cd-2687f66e1c8a\">GL347</a> (<a href=\"http://www.wormbase.org/db/get?name=WBStrain00034068;class=Strain\" id=\"6638acd6-00ab-404a-bb26-b55ee0ec1610\">SJ4100</a> p<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00002010;class=Gene\" id=\"151a021d-d89a-4884-b8fb-4a676db5fbce\">hsp-6</a></i>::GFP backcrossed 6× to <a href=\"http://www.wormbase.org/db/get?name=WBStrain00000001;class=Strain\" id=\"418413cb-5d0a-4971-946b-123c3e8255a3\">N2</a>) and <a id=\"e1a655b8-c82b-4ed7-a637-4cfa101c9d91\">GL364</a> (<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00001411;class=Gene\" id=\"663659b2-ef66-4bc0-9981-d96961895131\">fem-1</a></i>(<i><a href=\"http://www.wormbase.org/db/get?name=WBVar00087750;class=Variation\" id=\"727e2cc7-db48-4f52-beed-19687927abf9\">hc17</a></i>); p<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00002010;class=Gene\" id=\"943ddd58-972a-4d26-b822-43d9737a9c2b\">hsp-6</a></i>::GFP).</p><p><b>Nematode and bacterial culture conditions. </b>Nematodes were maintained on nematode growth medium (NGM) plates. NGM plates were seeded with <i><a href=\"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&amp;id=562\" id=\"64d3f9f2-37c0-408a-9c00-c008be7a79b4\">Escherichia coli</a></i> <a href=\"http://www.wormbase.org/db/get?name=WBStrain00041969;class=Strain\" id=\"e693f170-5953-4ca5-9388-5043e0486121\">OP50</a> obtained from CGC that was grown in LB at 37°C for 18 hours shaking at 225 rpm. Seeded plates were dried for 48 hours at room temperature before use. For RNAi experiments, <a href=\"http://www.wormbase.org/db/get?name=WBStrain00041079;class=Strain\" id=\"a98fd68a-6b1c-4c2a-81a9-12448c7f50f2\">HT115</a> (<a>DE3</a>) bacteria obtained from the Horizon Biosciences RNAi library were used. All RNAi clones were verified via sequencing. RNAi plates were prepared by cooling NGM to 55°C and supplementing with a final concentration of 50μg/ml carbenicillin and 1 mM isopropyl β-d-1-thiogalactopyranoside (IPTG). RNAi bacteria were inoculated with one colony of RNAi bacteria into LB with 50μg/ml carbenicillin and were grown shaking overnight for 18 hours at 37° at 225 rpm. RNAi cultures were seeded on RNAi plates and allowed to grow for 48 hours at room temperature. Plates were stored at 4 °C for no longer than 2 weeks.</p><p><b>Microscopy.</b> Nematodes were anesthetized with 2 - 5mM levamisole and mounted on 2% agarose pads on glass slides. Fluorescence micrographs of GFP were taken using a Zeiss Axioscope 5 fluorescent compound microscope equipped with Zen microscopy imaging program. GFP expression was enhanced using the brightness/contrast tool in Adobe Photoshop. The same parameters were used for all images. GFP intensity of nematodes was quantified using ImageJ 1.54G. The “integrated density” of GFP expression and length of nematodes was measured using ImageJ tools. Integrated density value was normalized by number of nematodes and average length of nematodes. The final value is in arbitrary units.</p><p><b>Statistics. </b>Significance between control and experimental groups was determined by using a two-tailed Student's <i>t</i>-test. Asterisks denote corresponding statistical significance: *<i>p &lt; </i>0.05; **<i>p</i> &lt; 0.01; ***<i>p</i> &lt; 0.001. Error bars were generated using the standard error of the mean (SEM), typically from three or more pooled biological replicates.</p>","reagents":"<p></p>","patternDescription":"<p>Age-related diseases, such as cardiovascular disease, cancer, and neurodegenerative syndromes can display sex-specific differences. Since mitochondrial dysfunction is central to most age-related diseases, we examine the mitochondrial unfolded protein response (UPR<sup>mt</sup>), a conserved, broad-range transcriptional response that, among other functions, aids in the refolding of mitochondrial matrix proteins (Kim, Ramalho, and Haynes 2024). In <i><a href=\"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&amp;id=6239\" id=\"d8962939-8029-493b-b406-ca6b61505a78\">C. elegans</a></i>, UPR<sup>mt</sup> activation is largely localized to the intestine, the major metabolic tissue in the nematode. In addition to digestion, the intestine also carries out many functions similar to the liver, such as detoxification, immunity, and fat metabolism (Dimov and Maduro 2019). We and others recently discovered that the activation of the intestinal UPR<sup>mt</sup> depends on the function of another tissue: the germline (Foulger et al. 2025; Charmpilas et al. 2024; Shen et al. 2024; Zhou et al. 2024)<sup>.</sup> Specifically, we found that adult nematodes with actively proliferating germlines, such as hermaphrodites or mated females, can activate a robust UPR<sup>mt</sup> in the intestines when challenged with either a high dose of the metal manganese (Mn) or RNAi of the OSCP/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00000230;class=Gene\" id=\"7a42bdf9-48cc-4783-9bcc-05e03c086835\">atp-3</a></i> subunit of complex V (Foulger et al. 2025). Conversely, adult nematodes with mutations that lead to a lack germline stem cells or lack of sperm, such <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00001609;class=Gene\" id=\"9cb3522a-9b99-4562-abcd-4e8c4bbb9642\">glp-1</a></i> or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00001411;class=Gene\" id=\"a5fb1668-66ce-4a51-878b-369d7c5861c1\">fem-1</a></i> mutants, cannot activate the intestinal UPR<sup>mt</sup>. Additionally, we found that loss of the transcription factor FOXO/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00000912;class=Gene\" id=\"a0d52c1f-d943-44b5-a731-2a5d53c2b19c\">daf-16</a></i> fully restored the UPR<sup>mt</sup> in <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00001411;class=Gene\" id=\"cac48b7a-c416-44f5-82dd-fa3622f56d95\">fem-1</a></i> mutants (Foulger et al. 2025). Here, we probe whether vitellogenesis, which occurs in the intestines and is dependent on FOXO/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00000912;class=Gene\" id=\"e9a83e72-2e19-4edf-b16a-89de776e8f06\">daf-16</a></i>, impacts the UPR<sup>mt</sup>.</p><p>Vitellogenins are precursor yolk proteins that provide nutrients to developing embryos. In <i><a href=\"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&amp;id=6239\" id=\"9d6e8c31-7d09-40d0-9604-372973993daf\">C. elegans</a>, </i>the highly conserved genes <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"6c5148bc-1c46-47f3-8ad6-ad1b787adcb3\">vit-1</a> </i>through <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006930;class=Gene\" id=\"6ad8ea81-5840-4644-b3a8-2d9fca7aba95\">vit-6</a> </i>are responsible for encoding these proteins (Perez and Lehner 2019). In hermaphrodites, they are synthesized in the intestines and transported into the pseudocoelom and to maturing oocytes (Perez and Lehner 2019). Young adult <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00001411;class=Gene\" id=\"a4bb0d06-7908-4c00-b10a-44cc9dc7c740\">fem-1</a></i> mutants display elevated yolk content compared to wild-type hermaphrodites at Day 1 of adulthood (DePina et al. 2011), presumably due to a lack of vitellogenin transport out of the intestines to maturing oocytes. We used RNAi to knockdown<i> <a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"bd289008-6eed-4297-9228-1f10d34e9856\">vit-1</a></i>, <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006927;class=Gene\" id=\"c69534a6-7d2e-4c1d-9534-dcefe8fbef2b\">vit-3</a></i>, <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006929;class=Gene\" id=\"f584b7d5-eac7-4725-8915-994fc1594f5a\">vit-5</a></i>, or all three genes simultaneously (<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"51068dc6-f50a-4c4c-9e71-4009278e3b03\">vit-1</a>,3,5</i>) and monitored intestinal activation of the UPR<sup>mt</sup> in young adult nematodes. We used the UPR<sup>mt</sup> reporter in which the GFP expression is driven by the promoter of the mitochondrial chaperone mtHsp70/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00002010;class=Gene\" id=\"547d16f6-7c53-43b2-8a7a-63e8e69d226f\">hsp-6</a></i> (Yoneda et al. 2004). We additionally used RNAi of OSCP/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00000230;class=Gene\" id=\"4cf0d85d-4ad2-4051-a5e5-902287da68d7\">atp-3</a> </i>to induce the UPR<sup>mt</sup> in young adult nematodes as previously described (Angeli et al. 2021). We found that in hermaphroditic nematodes, knockdown of <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"3ce1c768-ba2a-415e-8514-ccb79d4500eb\">vit-1</a></i> trended toward elevating the intestinal UPR<sup>mt</sup> (p=0.0504) and knockdown of <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006927;class=Gene\" id=\"32c3020f-b0f1-4629-9fc5-7360f77e9cac\">vit-3</a></i>, <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006929;class=Gene\" id=\"70a6a164-85cf-4921-9e8b-8089f31b3382\">vit-5</a></i>, or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"7b5dbc38-8495-41cd-9d5d-e4c54f1e3659\">vit-1</a>,3,5 </i>all significantly elevated the UPR<sup>mt </sup>(<b>Figure 1A-1D</b>). In contrast, knockdown of<i> <a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"b7fea0a4-8be8-4a7a-8415-6ff584da93b1\">vit-1</a></i>, <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006927;class=Gene\" id=\"8cf7ae73-1df0-48bb-a080-a3df017b4625\">vit-3</a></i>, or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006929;class=Gene\" id=\"806db2f4-b4e1-4f16-8453-710da42f1713\">vit-5</a> </i>did not significantly alter the UPR<sup>mt</sup> of <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00001411;class=Gene\" id=\"167e45ed-9816-4f8f-96df-68e050a541c4\">fem-1</a></i> mutants (<b>Figure 1A-1D</b>). The knockdown of <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"85b39acf-045d-49ee-9eba-0a98ddf16b5f\">vit-1</a>,3,5</i> did significantly enhance the UPR<sup>mt</sup> of the <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00001411;class=Gene\" id=\"d31168ea-4042-4f81-8383-93f70500de2f\">fem-1</a></i> mutants, but not to wild-types levels (<b>Figure 1D</b>). One caveat of this study is that we were not able to procure RNAi clones for <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006926;class=Gene\" id=\"fbcdb4f8-e7b4-49a2-a62e-6ab4eff07352\">vit-2</a></i>, <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006928;class=Gene\" id=\"f55b111a-66f0-4b0e-a093-3dbb51ba3a18\">vit-4</a></i>, or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006930;class=Gene\" id=\"6288ac0c-555b-4a91-aded-a1e3fdd9e9b9\">vit-6</a></i>. However, since <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006926;class=Gene\" id=\"200ebd4d-dfd9-4024-94a7-4e16482bf1c9\">vit-2</a></i> is over 80% identical to <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"8fd6d313-c700-4cb1-a297-794c8f87ea33\">vit-1</a></i> and <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006927;class=Gene\" id=\"b7d5a706-bc97-4550-a3f5-ce2ff617d629\">vit-3</a></i>/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006928;class=Gene\" id=\"95a5b73d-d38b-4da9-b7da-ecf679fd71bf\">vit-4</a></i> are duplicated genes that are 99% identical (Perez and Lehner 2019), we would expect to observe more impact from individual RNAi knockdown on females if these vitellogenins played an outsized role on the UPR<sup>mt</sup>. The <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006930;class=Gene\" id=\"4ffd649c-ecb2-4c72-a1bd-7903e83ec7dc\">vit-6</a></i> gene is the most divergent vitellogenin, so it remains possible that it plays an untested role in the UPR<sup>mt</sup>. Overall, while it does appear that vitellogenins can mildly suppress the adult UPR<sup>mt</sup>, especially in hermaphroditic nematodes, we conclude that additional germline-to-intestinal signals are responsible for the potent suppression of the UPR<sup>mt</sup> in female nematodes.</p>","references":[{"reference":"<p>Angeli S, Foulger A, Chamoli M, Peiris TH, Gerencser A, Shahmirzadi AA, Andersen J, Lithgow G. 2021. The mitochondrial permeability transition pore activates the mitochondrial unfolded protein response and promotes aging. eLife 10: 10.7554/elife.63453.</p>","pubmedId":"","doi":"10.7554/eLife.63453"},{"reference":"<p>Charmpilas N, Sotiriou A, Axarlis K, Tavernarakis N, Hoppe T. 2024. Reproductive regulation of the mitochondrial stress response in Caenorhabditis elegans. Cell Reports 43: 114336.</p>","pubmedId":"","doi":"10.1016/j.celrep.2024.114336"},{"reference":"<p>DePina AS, Iser WB, Park SS, Maudsley S, Wilson MA, Wolkow CA. 2011. Regulation of Caenorhabditis elegans vitellogenesis by DAF-2/IIS through separable transcriptional and posttranscriptional mechanisms. BMC Physiology 11: 10.1186/1472-6793-11-11.</p>","pubmedId":"","doi":"10.1186/1472-6793-11-11"},{"reference":"<p>Dimov I, Maduro MF. 2019. The C. elegans intestine: organogenesis, digestion, and physiology. Cell and Tissue Research 377: 383-396.</p>","pubmedId":"","doi":" 10.1007/s00441-019-03036-4"},{"reference":"<p>Foulger AC, Jordan NA, Castle A, Bhaumik D, Andersen JK, Lithgow GJ, Angeli S. 2025. Germline regulation of the intestinal mitochondrial unfolded protein response. GeroScience : 10.1007/s11357-025-01890-5.</p>","pubmedId":"","doi":"10.1007/s11357-025-01890-5"},{"reference":"<p>Kim S, Ramalho TR, Haynes CM. 2024. Regulation of proteostasis and innate immunity via mitochondria-nuclear communication. Journal of Cell Biology 223: 10.1083/jcb.202310005.</p>","pubmedId":"","doi":"10.1083/jcb.202310005"},{"reference":"<p>Perez MF, Lehner B. 2019. Vitellogenins - Yolk Gene Function and Regulation in Caenorhabditis elegans. Frontiers in Physiology 10: 10.3389/fphys.2019.01067.</p>","pubmedId":"","doi":"10.3389/fphys.2019.01067"},{"reference":"<p>Shen K, Durieux J, Mena CG, Webster BM, Tsui CK, Zhang H, et al., Dillin. 2024. The germline coordinates mitokine signaling. Cell 187: 4605-4620.e17.</p>","pubmedId":"","doi":" 10.1016/j.cell.2024.06.010"},{"reference":"<p>Sulston J, H.J., <i>Methods</i>, in <i>The Nematode Caenorhabditis elegans</i>, W.B. W., Editor. 1988, Cold Spring Harbor Laboratory Press Cold Spring Harbor. p. 587-606</p>","pubmedId":"","doi":""},{"reference":"<p>Yoneda T, Benedetti C, Urano F, Clark SG, Harding HP, Ron D. 2004. Compartment-specific perturbation of protein handling activates genes encoding mitochondrial chaperones. Journal of Cell Science 117: 4055-4066.</p>","pubmedId":"","doi":" 10.1242/jcs.01275"},{"reference":"<p>Zhou L, Jiang L, Li L, Ma C, Xia P, Ding W, Liu Y. 2024. A germline-to-soma signal triggers an age-related decline of mitochondrial stress response. Nature Communications 15: 10.1038/s41467-024-53064-0.</p>","pubmedId":"","doi":" 10.1038/s41467-024-53064-0"}],"title":"<p>Role of vitellogenins on the mitochondrial unfolded protein response</p>","reviews":[],"curatorReviews":[{"curator":{"displayName":"Gary Craig Schindelman"},"openAcknowledgement":false,"submitted":"1790462974678"}]},{"id":"ecf00b95-8783-4fa6-83d2-f24677e96cac","decision":"publish","abstract":"<p>Sex-specific differences influence aging and disease onset. Using <i><a href=\"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&amp;id=6239\" id=\"fbbdd4f3-3a46-4c0a-b8ba-bfd8b4b36cda\">Caenorhabditis elegans</a></i>, we previously found that hermaphroditic nematodes activate a robust mitochondrial unfolded protein response (UPR<sup>mt</sup>) in the intestines, while female nematodes do not. We hypothesized that the accumulation of vitellogenins in females was suppressing the UPR<sup>mt</sup>. Loss of vitellogenins via RNAi enhanced the UPR<sup>mt</sup> in hermaphrodites but had no impact on the UPR<sup>mt</sup> of females unless a combination of vitellogenins was simultaneously knocked down. Furthermore, combinatorial loss of vitellogenins did not restore the female UPR<sup>mt</sup> to hermaphroditic levels. We conclude that additional factors besides vitellogenins are involved in suppressing the intestinal UPR<sup>mt </sup>in female nematodes.</p>","acknowledgements":"<p>We thank the <i>Caenorhabditis</i> Genetics Center (CGC), which is funded by the NIH Office of Research Infrastructure Programs (P40 OD010440).</p>","authors":[{"affiliations":["University of Maine"],"departments":["Molecular and Biomedical Sciences"],"credit":["dataCuration","methodology","validation","writing_originalDraft","formalAnalysis"],"email":"nathaniel.a.jordan@maine.edu","firstName":"Nathanial A.","lastName":"Jordan","submittingAuthor":false,"correspondingAuthor":false,"equalContribution":false,"WBId":null,"orcid":null},{"affiliations":["University of Maine"],"departments":["Molecular and Biomedical Sciences"],"credit":["conceptualization","fundingAcquisition","supervision","writing_reviewEditing"],"email":"suzanne.angeli@maine.edu","firstName":"Suzanne","lastName":"Angeli","submittingAuthor":true,"correspondingAuthor":true,"equalContribution":false,"WBId":null,"orcid":null}],"awards":[{"awardId":"5P20GM144265 - 03 ","funderName":"National Institute of General Medical Sciences (United States)","awardRecipient":"Suzanne Angeli"}],"conflictsOfInterest":"<p>The authors declare that there are no conflicts of interest present.</p>","dataTable":{"url":null},"extendedData":[],"funding":"<p>NIGMS COBRE Research Pilot Project Subaward 5P20GM144265 - 03 and the UMaine Institute of Medicine.</p>","image":{"url":"https://portal.micropublication.org/uploads/d6b2a6ea0e651800efdd64682967f9f4.png"},"imageCaption":"<p> <i>A-D</i>. Quantification of GFP intensity from <i>p<a href=\"http://www.wormbase.org/db/get?name=WBGene00002010;class=Gene\" id=\"2aeab6f5-9f01-4dd0-ad3d-45989f14d782\">hsp-6</a></i>::GFP or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00001411;class=Gene\" id=\"feed7c3d-4bd8-432f-8a0f-69d05b8fd813\">fem-1</a></i>(<i><a href=\"http://www.wormbase.org/db/get?name=WBVar00087750;class=Variation\" id=\"61e74894-6d51-4712-b611-4464d5226be5\">hc17</a></i>); p<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00002010;class=Gene\" id=\"10e111df-00af-4836-8b8e-e022d631f3ae\">hsp-6</a></i>::GFP nematodes. For single vitellogenin gene knockdown, nematodes were developed on either control vector (CV) RNAi or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"cb449d26-e939-423c-a650-2683cc8d0c67\">vit-1</a></i> (<i>A</i>), <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006927;class=Gene\" id=\"1ec06419-0334-4634-80a8-a3f770dc3a8b\">vit-3</a></i> (<i>B</i>), or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006929;class=Gene\" id=\"981ed71c-0fe4-4779-a6d5-b9e0eeaf68ea\">vit-5</a></i> (<i>C</i>) RNAi at 25°C. At the young adult stage, control worms were shifted to 2o°C and onto RNAi plates seeded with CV or CV/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00000230;class=Gene\" id=\"77bd446e-285f-41cf-b775-cc969b810acf\">atp-3</a></i> (50%/50% RNAi mixture). Vitellogenin RNAi treated worms were shifted to 2o°C and onto RNAi plates seeded with the indicated CV/<i>vit</i> RNAi or <i>vit</i>/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00000230;class=Gene\" id=\"0c358c1a-debf-4f38-abba-6ccbb6ae90da\">atp-3</a> </i>(50%/50% RNAi mixture). For the combinatorial vitellogenin gene knockdown (<i>D</i>), nematodes were developed on either control vector (CV) RNAi or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"4fab8e65-7a9b-4306-86fe-1502c576ec7d\">vit-1</a></i>, <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006927;class=Gene\" id=\"cee0f6c9-a2de-47cd-83b9-1b0b05cca801\">vit-3</a></i>, <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006929;class=Gene\" id=\"dc89bd60-75ca-4dc0-b548-3d3d9e16035a\">vit-5</a></i> (33%/33%/33% mixture) RNAi at 25°C. At the young adult stage, vitellogenin RNAi treated worms were shifted to 2o°C and onto RNAi plates seeded with the CV/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"9de425cd-28dc-4276-bfd3-debcbdacb1e3\">vit-1</a>,3,5</i> RNAi (50%/50% combinatorial RNAi mixture) or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"72710eee-e075-4fc5-8765-f4eff7eeb43c\">vit-1</a>,3,5</i>/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00000230;class=Gene\" id=\"1b75c2a2-9ceb-46df-ad54-5e0ea243230c\">atp-3</a> </i>(50% combinatorial mixture/50% <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00000230;class=Gene\" id=\"9ee97abe-5c3d-4258-babe-506f07cd1957\">atp-3</a></i> RNAi). Error bars represent ± SEM. ***<i>p ≤ </i>0.001, **<i>p≤ </i>0.01, and *<i>p≤ </i>0.05.</p>","imageTitle":"<p>Impact of vitellogenin RNAi on the UPR<sup>mt</sup></p>","methods":"<p><b>Strains.</b> Bristol <a href=\"http://www.wormbase.org/db/get?name=WBStrain00000001;class=Strain\" id=\"12c24628-3e0a-450f-a76a-f656479a22c8\">N2</a> (wild type) nematodes were obtained from the <i><a href=\"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&amp;id=6237\" id=\"bdf7919a-2fac-458a-828a-cd90eec0636e\">Caenorhabditis</a></i> Genetics Center (CGC, University of Minnesota) and cultured using standard conditions (Sulston J 1988). The following strains were used: <a href=\"http://www.wormbase.org/db/get?name=WBStrain00049994;class=Strain\" id=\"4dada6fb-f7b2-4f9e-a6cd-2687f66e1c8a\">GL347</a> (<a href=\"http://www.wormbase.org/db/get?name=WBStrain00034068;class=Strain\" id=\"6638acd6-00ab-404a-bb26-b55ee0ec1610\">SJ4100</a> p<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00002010;class=Gene\" id=\"151a021d-d89a-4884-b8fb-4a676db5fbce\">hsp-6</a></i>::GFP backcrossed 6× to <a href=\"http://www.wormbase.org/db/get?name=WBStrain00000001;class=Strain\" id=\"418413cb-5d0a-4971-946b-123c3e8255a3\">N2</a>) and <a id=\"e1a655b8-c82b-4ed7-a637-4cfa101c9d91\">GL364</a> (<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00001411;class=Gene\" id=\"663659b2-ef66-4bc0-9981-d96961895131\">fem-1</a></i>(<i><a href=\"http://www.wormbase.org/db/get?name=WBVar00087750;class=Variation\" id=\"727e2cc7-db48-4f52-beed-19687927abf9\">hc17</a></i>); p<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00002010;class=Gene\" id=\"943ddd58-972a-4d26-b822-43d9737a9c2b\">hsp-6</a></i>::GFP).</p><p><b>Nematode and bacterial culture conditions. </b>Nematodes were maintained on nematode growth medium (NGM) plates. NGM plates were seeded with <i><a href=\"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&amp;id=562\" id=\"64d3f9f2-37c0-408a-9c00-c008be7a79b4\">Escherichia coli</a></i> <a href=\"http://www.wormbase.org/db/get?name=WBStrain00041969;class=Strain\" id=\"e693f170-5953-4ca5-9388-5043e0486121\">OP50</a> obtained from CGC that was grown in LB at 37°C for 18 hours shaking at 225 rpm. Seeded plates were dried for 48 hours at room temperature before use. For RNAi experiments, <a href=\"http://www.wormbase.org/db/get?name=WBStrain00041079;class=Strain\" id=\"a98fd68a-6b1c-4c2a-81a9-12448c7f50f2\">HT115</a> (<a>DE3</a>) bacteria obtained from the Horizon Biosciences RNAi library were used. All RNAi clones were verified via sequencing. RNAi plates were prepared by cooling NGM to 55°C and supplementing with a final concentration of 50μg/ml carbenicillin and 1 mM isopropyl β-d-1-thiogalactopyranoside (IPTG). RNAi bacteria were inoculated with one colony of RNAi bacteria into LB with 50μg/ml carbenicillin and were grown shaking overnight for 18 hours at 37° at 225 rpm. RNAi cultures were seeded on RNAi plates and allowed to grow for 48 hours at room temperature. Plates were stored at 4 °C for no longer than 2 weeks.</p><p><b>Microscopy.</b> Nematodes were anesthetized with 2 - 5mM levamisole and mounted on 2% agarose pads on glass slides. Fluorescence micrographs of GFP were taken using a Zeiss Axioscope 5 fluorescent compound microscope equipped with Zen microscopy imaging program. GFP expression was enhanced using the brightness/contrast tool in Adobe Photoshop. The same parameters were used for all images. GFP intensity of nematodes was quantified using ImageJ 1.54G. The “integrated density” of GFP expression and length of nematodes was measured using ImageJ tools. Integrated density value was normalized by number of nematodes and average length of nematodes. The final value is in arbitrary units.</p><p><b>Statistics. </b>Significance between control and experimental groups was determined by using a two-tailed Student's <i>t</i>-test. Asterisks denote corresponding statistical significance: *<i>p &lt; </i>0.05; **<i>p</i> &lt; 0.01; ***<i>p</i> &lt; 0.001. Error bars were generated using the standard error of the mean (SEM), typically from three or more pooled biological replicates.</p>","reagents":"<p></p>","patternDescription":"<p>Age-related diseases, such as cardiovascular disease, cancer, and neurodegenerative syndromes can display sex-specific differences. Since mitochondrial dysfunction is central to most age-related diseases, we examined the mitochondrial unfolded protein response (UPR<sup>mt</sup>), a conserved, broad-range transcriptional response that, among other functions, aids in the refolding of mitochondrial matrix proteins (Kim, Ramalho, and Haynes 2024). In <i><a href=\"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&amp;id=6239\" id=\"d8962939-8029-493b-b406-ca6b61505a78\">C. elegans</a></i>, UPR<sup>mt</sup> activation is largely localized to the intestine, the major metabolic tissue in the nematode. In addition to digestion, the intestine also carries out many functions similar to the liver, such as detoxification, immunity, and fat metabolism (Dimov and Maduro 2019). We and others recently discovered that the activation of the intestinal UPR<sup>mt</sup> depends on the function of another tissue: the germline (Foulger et al. 2025; Charmpilas et al. 2024; Shen et al. 2024; Zhou et al. 2024)<sup>.</sup> Specifically, we found that adult nematodes with actively proliferating germlines, such as hermaphrodites or mated females, can activate a robust UPR<sup>mt</sup> in the intestines when challenged with either a high dose of the metal manganese (Mn) or RNAi of the OSCP/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00000230;class=Gene\" id=\"7a42bdf9-48cc-4783-9bcc-05e03c086835\">atp-3</a></i> subunit of complex V (Foulger et al. 2025). Conversely, adult nematodes with mutations that lead to a lack germline stem cells or lack of sperm, such <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00001609;class=Gene\" id=\"9cb3522a-9b99-4562-abcd-4e8c4bbb9642\">glp-1</a></i> or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00001411;class=Gene\" id=\"a5fb1668-66ce-4a51-878b-369d7c5861c1\">fem-1</a></i> mutants, cannot activate the intestinal UPR<sup>mt</sup>. Additionally, we found that loss of the transcription factor FOXO/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00000912;class=Gene\" id=\"a0d52c1f-d943-44b5-a731-2a5d53c2b19c\">daf-16</a></i> fully restored the UPR<sup>mt</sup> in <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00001411;class=Gene\" id=\"cac48b7a-c416-44f5-82dd-fa3622f56d95\">fem-1</a></i> mutants (Foulger et al. 2025). Here, we probe whether vitellogenesis, which occurs in the intestines and is dependent on FOXO/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00000912;class=Gene\" id=\"e9a83e72-2e19-4edf-b16a-89de776e8f06\">daf-16</a></i>, impacts the UPR<sup>mt</sup>.</p><p>Vitellogenins are precursor yolk proteins that provide nutrients to developing embryos. In <i><a href=\"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&amp;id=6239\" id=\"9d6e8c31-7d09-40d0-9604-372973993daf\">C. elegans</a>, </i>the highly conserved genes <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"6c5148bc-1c46-47f3-8ad6-ad1b787adcb3\">vit-1</a> </i>through <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006930;class=Gene\" id=\"6ad8ea81-5840-4644-b3a8-2d9fca7aba95\">vit-6</a> </i>are responsible for encoding these proteins (Perez and Lehner 2019). In hermaphrodites, they are synthesized in the intestines and transported into the pseudocoelom and to maturing oocytes (Perez and Lehner 2019). Young adult <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00001411;class=Gene\" id=\"a4bb0d06-7908-4c00-b10a-44cc9dc7c740\">fem-1</a></i> mutants display elevated yolk content compared to wild-type hermaphrodites at Day 1 of adulthood (DePina et al. 2011), presumably due to a lack of vitellogenin transport out of the intestines to maturing oocytes. We used RNAi to knockdown<i> <a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"bd289008-6eed-4297-9228-1f10d34e9856\">vit-1</a></i>, <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006927;class=Gene\" id=\"c69534a6-7d2e-4c1d-9534-dcefe8fbef2b\">vit-3</a></i>, <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006929;class=Gene\" id=\"f584b7d5-eac7-4725-8915-994fc1594f5a\">vit-5</a></i>, or all three genes simultaneously (<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"51068dc6-f50a-4c4c-9e71-4009278e3b03\">vit-1</a>,3,5</i>) and monitored intestinal activation of the UPR<sup>mt</sup> in young adult nematodes. We used the UPR<sup>mt</sup> reporter in which the GFP expression is driven by the promoter of the mitochondrial chaperone mtHsp70/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00002010;class=Gene\" id=\"547d16f6-7c53-43b2-8a7a-63e8e69d226f\">hsp-6</a></i> (Yoneda et al. 2004). We additionally used RNAi of OSCP/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00000230;class=Gene\" id=\"4cf0d85d-4ad2-4051-a5e5-902287da68d7\">atp-3</a> </i>to induce the UPR<sup>mt</sup> in young adult nematodes as previously described (Angeli et al. 2021). We found that in hermaphroditic nematodes, knockdown of <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"3ce1c768-ba2a-415e-8514-ccb79d4500eb\">vit-1</a></i> trended toward elevating the intestinal UPR<sup>mt</sup> (p=0.0504) and knockdown of <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006927;class=Gene\" id=\"32c3020f-b0f1-4629-9fc5-7360f77e9cac\">vit-3</a></i>, <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006929;class=Gene\" id=\"70a6a164-85cf-4921-9e8b-8089f31b3382\">vit-5</a></i>, or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"7b5dbc38-8495-41cd-9d5d-e4c54f1e3659\">vit-1</a>,3,5 </i>all significantly elevated the UPR<sup>mt </sup>(<b>Figure 1A-1D</b>). In contrast, knockdown of<i> <a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"b7fea0a4-8be8-4a7a-8415-6ff584da93b1\">vit-1</a></i>, <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006927;class=Gene\" id=\"8cf7ae73-1df0-48bb-a080-a3df017b4625\">vit-3</a></i>, or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006929;class=Gene\" id=\"806db2f4-b4e1-4f16-8453-710da42f1713\">vit-5</a> </i>did not significantly alter the UPR<sup>mt</sup> of <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00001411;class=Gene\" id=\"167e45ed-9816-4f8f-96df-68e050a541c4\">fem-1</a></i> mutants (<b>Figure 1A-1D</b>). The knockdown of <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"85b39acf-045d-49ee-9eba-0a98ddf16b5f\">vit-1</a>,3,5</i> did significantly enhance the UPR<sup>mt</sup> of the <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00001411;class=Gene\" id=\"d31168ea-4042-4f81-8383-93f70500de2f\">fem-1</a></i> mutants, but not to wild-types levels (<b>Figure 1D</b>). One caveat of this study is that we were not able to procure RNAi clones for <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006926;class=Gene\" id=\"fbcdb4f8-e7b4-49a2-a62e-6ab4eff07352\">vit-2</a></i>, <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006928;class=Gene\" id=\"f55b111a-66f0-4b0e-a093-3dbb51ba3a18\">vit-4</a></i>, or <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006930;class=Gene\" id=\"6288ac0c-555b-4a91-aded-a1e3fdd9e9b9\">vit-6</a></i>. However, since <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006926;class=Gene\" id=\"200ebd4d-dfd9-4024-94a7-4e16482bf1c9\">vit-2</a></i> is over 80% identical to <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006925;class=Gene\" id=\"8fd6d313-c700-4cb1-a297-794c8f87ea33\">vit-1</a></i> and <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006927;class=Gene\" id=\"b7d5a706-bc97-4550-a3f5-ce2ff617d629\">vit-3</a></i>/<i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006928;class=Gene\" id=\"95a5b73d-d38b-4da9-b7da-ecf679fd71bf\">vit-4</a></i> are duplicated genes that are 99% identical (Perez and Lehner 2019), we would expect to observe more impact from individual RNAi knockdown on females if these vitellogenins played an outsized role on the UPR<sup>mt</sup>. The <i><a href=\"http://www.wormbase.org/db/get?name=WBGene00006930;class=Gene\" id=\"4ffd649c-ecb2-4c72-a1bd-7903e83ec7dc\">vit-6</a></i> gene is the most divergent vitellogenin, so it remains possible that it plays an untested role in the UPR<sup>mt</sup>. Overall, while it does appear that vitellogenins can mildly suppress the adult UPR<sup>mt</sup>, especially in hermaphroditic nematodes, we conclude that additional germline-to-intestinal signals are responsible for the potent suppression of the UPR<sup>mt</sup> in female nematodes.</p>","references":[{"reference":"<p>Angeli S, Foulger A, Chamoli M, Peiris TH, Gerencser A, Shahmirzadi AA, Andersen J, Lithgow G. 2021. The mitochondrial permeability transition pore activates the mitochondrial unfolded protein response and promotes aging. eLife 10: 10.7554/elife.63453.</p>","pubmedId":"","doi":"10.7554/eLife.63453"},{"reference":"<p>Charmpilas N, Sotiriou A, Axarlis K, Tavernarakis N, Hoppe T. 2024. Reproductive regulation of the mitochondrial stress response in Caenorhabditis elegans. Cell Reports 43: 114336.</p>","pubmedId":"","doi":"10.1016/j.celrep.2024.114336"},{"reference":"<p>DePina AS, Iser WB, Park SS, Maudsley S, Wilson MA, Wolkow CA. 2011. Regulation of Caenorhabditis elegans vitellogenesis by DAF-2/IIS through separable transcriptional and posttranscriptional mechanisms. BMC Physiology 11: 10.1186/1472-6793-11-11.</p>","pubmedId":"","doi":"10.1186/1472-6793-11-11"},{"reference":"<p>Dimov I, Maduro MF. 2019. The C. elegans intestine: organogenesis, digestion, and physiology. Cell and Tissue Research 377: 383-396.</p>","pubmedId":"","doi":" 10.1007/s00441-019-03036-4"},{"reference":"<p>Foulger AC, Jordan NA, Castle A, Bhaumik D, Andersen JK, Lithgow GJ, Angeli S. 2025. Germline regulation of the intestinal mitochondrial unfolded protein response. GeroScience : 10.1007/s11357-025-01890-5.</p>","pubmedId":"","doi":"10.1007/s11357-025-01890-5"},{"reference":"<p>Kim S, Ramalho TR, Haynes CM. 2024. Regulation of proteostasis and innate immunity via mitochondria-nuclear communication. Journal of Cell Biology 223: 10.1083/jcb.202310005.</p>","pubmedId":"","doi":"10.1083/jcb.202310005"},{"reference":"<p>Perez MF, Lehner B. 2019. Vitellogenins - Yolk Gene Function and Regulation in Caenorhabditis elegans. Frontiers in Physiology 10: 10.3389/fphys.2019.01067.</p>","pubmedId":"","doi":"10.3389/fphys.2019.01067"},{"reference":"<p>Shen K, Durieux J, Mena CG, Webster BM, Tsui CK, Zhang H, et al., Dillin. 2024. The germline coordinates mitokine signaling. Cell 187: 4605-4620.e17.</p>","pubmedId":"","doi":" 10.1016/j.cell.2024.06.010"},{"reference":"<p>Sulston J, H.J., <i>Methods</i>, in <i>The Nematode Caenorhabditis elegans</i>, W.B. W., Editor. 1988, Cold Spring Harbor Laboratory Press Cold Spring Harbor. p. 587-606</p>","pubmedId":"","doi":""},{"reference":"<p>Yoneda T, Benedetti C, Urano F, Clark SG, Harding HP, Ron D. 2004. Compartment-specific perturbation of protein handling activates genes encoding mitochondrial chaperones. Journal of Cell Science 117: 4055-4066.</p>","pubmedId":"","doi":" 10.1242/jcs.01275"},{"reference":"<p>Zhou L, Jiang L, Li L, Ma C, Xia P, Ding W, Liu Y. 2024. A germline-to-soma signal triggers an age-related decline of mitochondrial stress response. Nature Communications 15: 10.1038/s41467-024-53064-0.</p>","pubmedId":"","doi":" 10.1038/s41467-024-53064-0"}],"title":"<p>Role of vitellogenins on the mitochondrial unfolded protein response</p>","reviews":[],"curatorReviews":[{"curator":{"displayName":"Gary Craig Schindelman"},"openAcknowledgement":false,"submitted":null}]}]}},"species":{"species":[{"value":"acer saccharum","label":"Acer saccharum","imageSrc":"","imageAlt":"","mod":"TreeGenes","modLink":"https://treegenesdb.org","linkVariable":""},{"value":"achillea millefolium","label":"Achillea millefolium","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"acinetobacter baylyi","label":"Acinetobacter baylyi","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"actinobacteria bacterium","label":"Actinobacteria bacterium","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"adelges tsugae","label":"Adelges tsugae","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"adenocaulon chilense","label":"Adenocaulon chilense","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"aedes japonicus","label":"Aedes japonicus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"aegorhinus vitulus","label":"Aegorhinus vitulus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"aerococcus","label":"Aerococcus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"alaimidae","label":"Alaimidae","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"allobates femoralis","label":"Allobates femoralis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"alnus glutinosa","label":"Alnus glutinosa","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"alosa aestivalis","label":"Alosa aestivalis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"alosa pseudoharengus","label":"Alosa pseudoharengus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"alternaria alternata","label":"Alternaria alternata","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"amynthas agrestis","label":"Amynthas Agrestis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"ancylostoma caninum","label":"Ancylostoma caninum","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"ancylostoma ceylanicum","label":"Ancylostoma ceylanicum","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"anemone multifida","label":"Anemone multifida","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"anguilla rostrata","label":"Anguilla rostrata","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"anisakis simplex","label":"Anisakis simplex","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"anomala albopilosa","label":"Anomala albopilosa","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"anthomyiidae sp","label":"Anthomyiidae sp","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"anthomyiidae sp","label":"Anthomyiidae sp","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"arabidopsis","label":"Arabidopsis","imageSrc":"arabidopsis.png","imageAlt":"Arabidopsis graphic by Zoe Zorn CC BY 4.0","mod":"TAIR","modLink":"https://arabidopsis.org","linkVariable":""},{"value":"architeuthis dux","label":"Architeuthis dux","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"arion vulgaris","label":"Arion vulgaris","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"armeria","label":"Armeria","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"artemia","label":"Artemia","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"arthrobacter sp.","label":"Arthrobacter sp.","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"ascaridia","label":"Ascaridia","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"ascaridia galli","label":"Ascaridia galli","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"asparagopsis taxiformis","label":"Asparagopsis taxiformis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"astatotilapia burtoni","label":"Astatotilapia burtoni","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"avena sativa","label":"Avena sativa","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"aves","label":"Aves","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"bacillus","label":"Bacillus (firmicutes)","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"bacillus cereus","label":"Bacillus cereus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"bacillus mycoides","label":"Bacillus mycoides","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"bacillus subtilis","label":"Bacillus subtilis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"bacillus thuringiensis","label":"Bacillus thuringiensis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"bacillus toyonensis","label":"Bacillus toyonensis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"bacillus wiedmannii","label":"Bacillus wiedmannii","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"bacteria","label":"Bacteria","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"bacteriophage","label":"Bacteriophage","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"bactrocera","label":"Bactrocera sp.","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"batrachospermum gelatinosum","label":"Batrachospermum gelatinosum","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"betula lenta","label":"Betula lenta","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"betula nigra","label":"Betula nigra","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"bombus dahlbohmii","label":"Bombus dahlbohmii","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"bombus terrestris","label":"Bombus terrestris","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"bombyx mori","label":"Bombyx mori","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"bos taurus","label":"Bos Taurus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"brachygobius doriae","label":"Brachygobius doriae","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"brassica oleracea","label":"Brassica oleracea","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"brassica rapa","label":"Brassica rapa","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"brugia malayi","label":"Brugia malayi","imageSrc":"","imageAlt":"","mod":"WormBase","modLink":"www.wormbase.org","linkVariable":""},{"value":"burkholderia thailandensis","label":"Burkholderia thailandensis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"buttiauxella","label":"Buttiauxella","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"caenorhabditis brenneri","label":"Caenorhabditis brenneri","imageSrc":"","imageAlt":"","mod":"WormBase","modLink":"www.wormbase.org","linkVariable":""},{"value":"caenorhabditis briggsae","label":"Caenorhabditis briggsae","imageSrc":"","imageAlt":"","mod":"WormBase","modLink":"www.wormbase.org","linkVariable":""},{"value":"c. elegans","label":"Caenorhabditis elegans","imageSrc":"c-elegans.jpg","imageAlt":"C. elegans graphic by Zoe Zorn CC BY 4.0","mod":"WormBase","modLink":"https://wormbase.org","linkVariable":""},{"value":"caenorhabditis inopinata","label":"Caenorhabditis inopinata","imageSrc":"","imageAlt":"","mod":"WormBase","modLink":"www.wormbase.org","linkVariable":""},{"value":"caenorhabditis japonica","label":"Caenorhabditis japonica","imageSrc":"","imageAlt":"","mod":"WormBase","modLink":"www.wormbase.org","linkVariable":""},{"value":"caenorhabditis nigoni","label":"Caenorhabditis nigoni","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"caenorhabditis remanei","label":"Caenorhabditis remanei","imageSrc":"","imageAlt":"","mod":"WormBase","modLink":"www.wormbase.org","linkVariable":""},{"value":"caenorhabditis tropicalis","label":"Caenorhabditis tropicalis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"calidifontibacillus","label":"Calidifontibacillus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"calidifontibacillus erzuremensis","label":"Calidifontibacillus erzuremensis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"calliphora sp","label":"Calliphora sp","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"caltha sagittata","label":"Caltha sagittata","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"cambarus latimanus","label":"Cambarus latimanus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"candida albicans","label":"Candida albicans","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"canis familiaris","label":"Canis familiaris","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"cannabis sativa","label":"Cannabis sativa","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"caretta caretta","label":"Caretta caretta","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"cassiopea xamachana","label":"Cassiopea xamachana","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"caulobacter vibrioides","label":"Caulobacter vibrioides","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"cephalopods","label":"Cephalopoda","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"cerastium arvense","label":"Cerastium arvense","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"ceriodaphnia","label":"Ceriodaphnia","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"ceroglossus suturalis","label":"Ceroglossus suturalis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"chaetoceros","label":"Chaetoceros","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"chamaecrista fasciculata","label":"Chamaecrista fasciculata","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"chilicola chalcidiformis","label":"Chilicola chalcidiformis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"chitinimonas","label":"Chitinimonas","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"chlamydomonas reinhardtii","label":"Chlamydomonas reinhardtii","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"chromobacterium","label":"Chromobacterium","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"chrysemys picta","label":"Chrysemys picta","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"chrysoperla rufilabris","label":"Chrysoperla rufilabris","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"citrus","label":"Citrus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"clavibacter sp.","label":"Clavibacter sp.","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"colinus virginianus","label":"Colinus virginianus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"crassostrea virginica","label":"Crassostrea virginica","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"crithidia fasciculata","label":"Crithidia fasciculata","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"cutibacterium acnes","label":"Cutibacterium acnes","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"cyanobacteria","label":"Cyanobacteria","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"daphnia","label":"Daphnia","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"daphnia pulex","label":"Daphnia pulex","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"dermacoccus nishinomiyaensis","label":"Dermacoccus nishinomiyaensis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"diabrotica virgifera","label":"Diabrotica virgifera","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"diabrotica virgifera virgifera virus 1","label":"Diabrotica virgifera virgifera virus 1","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"d. discoideum","label":"Dictyostelium discoideum","imageSrc":"dicty.png","imageAlt":"D. discoideum","mod":"dictyBase","modLink":"http://dictybase.org","linkVariable":""},{"value":"diptera","label":"Diptera","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"dotocryptus bellicosus","label":"Dotocryptus bellicosus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"drechmeria coniospora","label":"Drechmeria coniospora","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"drosophila","label":"Drosophila","imageSrc":"drosophila.png","imageAlt":"Drosophila graphic by Zoe Zorn CC BY 4.0","mod":"FlyBase","modLink":"https://flybase.org/doi/","linkVariable":"doi"},{"value":"dryopteris campyloptera","label":"Dryopteris campyloptera","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"dryopteris expansa","label":"Dryopteris expansa","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"dryopteris intermedia","label":"Dryopteris intermedia","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"dugesia dorotocephala","label":"Dugesia dorotocephala","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"elasmobranchii","label":"Elasmobranchii","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"embryophyta","label":"Embryophyta","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"enoploteuthis chunii","label":"Enoploteuthis chunii","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"enterobacter aerogenes","label":"Enterobacter aerogenes","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"enterococcus raffinosus","label":"Enterococcus raffinosus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"epichloë coenophiala","label":"Epichloë coenophiala","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"equus caballus","label":"Equus caballus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"erigeron sp","label":"Erigeron sp","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"eristalis","label":"Eristalis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"eruca vesicaria","label":"Eruca vesicaria","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"erwinia carotovora","label":"Erwinia carotovora","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"erythronium americanum","label":"Erythronium americanum","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"escherichia coli","label":"Escherichia coli","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"eukaryota","label":"Eukaryotes","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"felis catus","label":"Felis catus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"francisella novicida","label":"Francisella novicida","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"francisella tularensis","label":"Francisella tularensis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"fraxinus americana","label":"Fraxinus americana","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"fucus distichus","label":"Fucus distichus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"fungi","label":"Fungi","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"gasteropelecus sp.","label":"Gasteropelecus sp.","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"geranium sp","label":"Geranium sp","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"girardia","label":"Girardia","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"glaucomys volans","label":"Glaucomys volans","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"glycine max","label":"Glycine max","imageSrc":"","imageAlt":"","mod":"Soybase","modLink":"https://soybase.org","linkVariable":""},{"value":"glyptemys insculpta","label":"Glyptemys insculpta","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"gossypium hirsutum","label":"Gossypium hirsutum","imageSrc":"","imageAlt":"","mod":"CottonGen","modLink":"https://www.cottongen.org/","linkVariable":""},{"value":"gromphadorhina portentosa","label":"Gromphadorhina portentosa","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"gryllodes sigillatus","label":"Gryllodes sigillatus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"haliotis rufescens","label":"Haliotis rufescens","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"hepacivirus hominis","label":"Hepatitis C Virus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"herpes simplex virus type 1","label":"Herpes simplex virus type 1","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"human","label":"Human","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"human coronavirus oc43","label":"Human coronavirus OC43","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"hydra vulgaris","label":"Hydra vulgaris","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"hydropsyche sp","label":"Hydropsyche sp","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"hymenoptera","label":"Hymenoptera","imageSrc":"","imageAlt":"","mod":"Hymenoptera Genome Database","modLink":"https://hymenoptera.elsiklab.missouri.edu/","linkVariable":""},{"value":"hypochaeris radicata","label":"Hypochaeris radicata","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"hypodynerus vespiformis","label":"Hypodynerus vespiformis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"iflaviridae","label":"Iflaviridae","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"iflavuris","label":"Iflavirus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"ipomoea hederacea","label":"Ipomoea hederacea","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"ischnomera","label":"Ischnomera","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"ischnomera ruficollis","label":"Ischnomera ruficollis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"julidochromis marlieri","label":"Julidochromis marlieri","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"juniperus virginiana","label":"Juniperus virginiana","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"kluyveromyces marxianus","label":"Kluyveromyces marxianus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"l. casei","label":"L. casei","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"lacticaseibacillus casei","label":"Lacticaseibacillus casei","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"lactobacillus","label":"Lactobacillus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"larentiinae sp","label":"Larentiinae sp","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"laurus nobilis","label":"Laurus nobilis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"lepidoptera","label":"Lepidoptera","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"leucanthemum vulgare","label":"Leucanthemum vulgare","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"ligilactobacillus","label":"Ligilactobacillus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"ligilactobacillus salivarius","label":"Ligilactobacillus salivarius","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"limosilactobacillus","label":"Limosilactobacillus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"linepithema humile","label":"Linepithema humile","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"liometopum occidentale","label":"Liometopum occidentale","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"lolium arundinaceum","label":"Lolium arundinaceum","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"lontra longicaudis","label":"Lontra longicaudis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"lumbriculus variegatus","label":"Lumbriculus variegatus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"lumbricus terrestris","label":"Lumbricus terrestris","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"lupinus polyphyllus","label":"Lupinus polyphyllus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"lycorma delicatula","label":"Lycorma delicatula","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"lynx rufus","label":"Lynx rufus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"magnaporthe oryzae","label":"Magnaporthe oryzae","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"mammalia","label":"Mammalia","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"manihot esculenta","label":"Manihot esculenta","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"medicago lupulina","label":"Medicago lupulina","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"meloidogyne","label":"Meloidogyne","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"mimus polyglottos","label":"Mimus polyglottos","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"bryophyta","label":"Mosses","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"mouse","label":"Mouse","imageSrc":"","imageAlt":"","mod":"MGI","modLink":"https://informatics.jax.org","linkVariable":""},{"value":"m. minutoides","label":"Mus minutoides","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"mycobacterium smegmatis","label":"Mycobacterium smegmatis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"nakaseomyces glabratus","label":"Nakaseomyces glabratus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"nauphoeta cinerea","label":"Nauphoeta cinerea","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"neurospora","label":"Neurospora","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"n. benthamiana","label":"Nicotiana benthamiana","imageSrc":"","imageAlt":"","mod":"Solgenomics Network","modLink":"https://solgenomics.net/organism/Nicotiana_benthamiana/genome","linkVariable":""},{"value":"nicotiana tabacum","label":"Nicotiana tabacum","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"noctuidae","label":"Noctuidae","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"noctuidae sp","label":"Noctuidae sp","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"nothobranchius furzeri","label":"Nothobranchius furzeri","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"onchocerca volvulus","label":"Onchocerca volvulus","imageSrc":"","imageAlt":"","mod":"WormBase","modLink":"www.wormbase.org","linkVariable":""},{"value":"orconectes virilis","label":"Orconectes virilis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"ormia ochracea","label":"Ormia ochracea","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"o. sativa","label":"Oryza sativa","imageSrc":"","imageAlt":"","mod":"Gramene","modLink":"https://www.gramene.org/","linkVariable":""},{"value":"other","label":"Other","imageSrc":"","imageAlt":"","mod":null,"modLink":null,"linkVariable":null},{"value":"oxalis enneaphylla","label":"Oxalis enneaphylla","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"paenarthrobacter nicotinovorans","label":"Paenarthrobacter nicotinovorans","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"paenarthrobacter nicotinovorans","label":"Paenarthrobacter nicotinovorans","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"pantoea","label":"Pantoea","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"pantoea agglomerans","label":"Pantoea agglomerans","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"papaver sp","label":"Papaver sp","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"paramecium bursaria","label":"Paramecium bursaria","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"partitiviridae","label":"Partitiviridae","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"pelodiscus sinensis","label":"Pelodiscus sinensis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"perezia recurvata","label":"Perezia recurvata","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"petromyzon marinus","label":"Petromyzon marinus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"photinus pyralis","label":"Photinus pyralis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"photinus pyralis associated partiti-like virus","label":"Photinus pyralis associated partiti-like virus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"photinus pyralis iflavirus 1","label":"Photinus pyralis iflavirus 1","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"physcomitrium patens","label":"Physcomitrium patens","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"pinus strobus","label":"Pinus strobus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"pinus taeda","label":"Pinus taeda","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"platycheirus","label":"Platycheirus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"plectus sambesii","label":"Plectus sambesii","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"pogonomyrmex occidentalis","label":"Pogonomyrmex occidentalis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"poncirus trifoliata","label":"Poncirus trifoliata","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"populus deltoides","label":"Populus deltoides","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"potato virus y","label":"Potato virus Y","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"primula magellanica","label":"Primula magellanica","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"pristionchus pacificus","label":"Pristionchus pacificus","imageSrc":"","imageAlt":"","mod":"WormBase","modLink":"www.wormbase.org","linkVariable":""},{"value":"prunus persica","label":"Prunus persica","imageSrc":"","imageAlt":"","mod":"Genome Database for Rosaceae","modLink":"https://www.rosaceae.org/","linkVariable":""},{"value":"psalmopoeus iriminia","label":"Psalmopoeus iriminia","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"pseudanabaena sp.","label":"Pseudanabaena sp.","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"pseudomonas","label":"Pseudomonas","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"pseudomonas aeruginosa","label":"Pseudomonas aeruginosa","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"pseudomonas glycinae","label":"Pseudomonas glycinae","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"pseudomonas putida","label":"Pseudomonas putida","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"pseudomonas syringae","label":"Pseudomonas syringae","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"pterophyllum scalare","label":"Pterophyllum scalare","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"python regius","label":"Python regius","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"quercus macrocarpa","label":"Quercus macrocarpa","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"ralstonia solanacearum","label":"Ralstonia solanacearum","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"ranitomeya imitator","label":"Ranitomeya imitator","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"ranunculus peduncularis","label":"Ranunculus peduncularis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"rat","label":"Rat","imageSrc":"","imageAlt":"","mod":"RGD","modLink":"https://rgd.mcw.edu","linkVariable":""},{"value":"rheinheimera","label":"Rheinheimera","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"ribes rubrum","label":"Ribes rubrum","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"sars-cov-2","label":"SARS-CoV-2","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"s. cerevisiae","label":"Saccharomyces cerevisiae","imageSrc":"yeast.png","imageAlt":"Yeast graphic by Zoe Zorn CC BY 4.0","mod":"SGD","modLink":"https://yeastgenome.org","linkVariable":""},{"value":"saccharomyces paradoxus","label":"Saccharomyces paradoxus ","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"s. uvarum","label":"Saccharomyces uvarum","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"schistosoma","label":"Schistosoma","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"schizosaccharomyces japonicus","label":"Schizosaccharomyces japonicus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"s. pombe","label":"Schizosaccharomyces pombe","imageSrc":"pombe.png","imageAlt":"Pombe graphic by Zoe Zorn © Caltech","mod":"PomBase","modLink":"https://www.pombase.org/reference/PMID:","linkVariable":"pmId"},{"value":"schmidtea mediterranea","label":"Schmidtea mediterranea","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"senecio sp","label":"Senecio sp","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"simocephalus","label":"Simocephalus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"siraitia grosvenorii","label":"Siraitia grosvenorii","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"solanum lycopersicum","label":"Solanum lycopersicum","imageSrc":"","imageAlt":"","mod":"Solgenomics Network","modLink":"https://solgenomics.net/organism/1/view/","linkVariable":""},{"value":"sorghum","label":"Sorghum","imageSrc":"","imageAlt":"","mod":"SorghumBase","modLink":"https://www.sorghumbase.org","linkVariable":""},{"value":"spiroplasma eriocheiris","label":"Spiroplasma eriocheiris","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"staphylococcus aureus","label":"Staphylococcus aureus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"staphylococcus epidermidis","label":"Staphylococcus epidermidis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"steinernema carpocapsae","label":"Steinernema carpocapsae","imageSrc":"","imageAlt":"","mod":"WormBase","modLink":"https://wormbase.org","linkVariable":""},{"value":"steinernema hermaphroditum","label":"Steinernema hermaphroditum","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"stenotrophomonas geniculata","label":"Stenotrophomonas geniculata","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"stewartia floidana","label":"Stewartia floridana","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"streptococcus gordonii ","label":"Streptococcus gordonii ","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"streptococcus mutans","label":"Streptococcus mutans","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":" streptococcus pneumoniae","label":"Streptococcus pneumoniae","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"s. purpuratus","label":"Strongylocentrotus purpuratus","imageSrc":"","imageAlt":"","mod":"Echinobase","modLink":"https://www.echinobase.org","linkVariable":""},{"value":"strongyloides ratti","label":"Strongyloides ratti","imageSrc":"","imageAlt":"","mod":"WormBase","modLink":"www.wormbase.org","linkVariable":""},{"value":"sulfolobus","label":"Sulfolobus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"symphoricarpos albus","label":"Symphoricarpos albus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"syncirsodes","label":"Syncirsodes","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"synechococcus elongatus","label":"Synechococcus elongatus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"syrphidae","label":"Syrphidae","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"tarantobelus jeffdanielsi","label":"Tarantobelus jeffdanielsi","imageSrc":"","imageAlt":"","mod":"WormBase","modLink":"www.wormbase.org","linkVariable":""},{"value":"taraxacum officinale","label":"Taraxacum officinale","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"tatochila theodice","label":"Tatochila theodice","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"tetrahymena","label":"Tetrahymena","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"tetramorium immigrans","label":"Tetramorium immigrans","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"tomato brown rugose fruit virus","label":"ToBRFV","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"trachemys scripta","label":"Trachemys scripta","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"tribolium castaneum","label":"Tribolium castaneum","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"trichoptera","label":"Trichoptera","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"trichuris muris","label":"Trichuris muris","imageSrc":"","imageAlt":"","mod":"WormBase","modLink":"www.wormbase.org","linkVariable":""},{"value":"trifolium repens","label":"Trifolium repens","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"trypoxylus dichotomus","label":"Trypoxylus dichotomus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"tsuga canadensis","label":"Tsuga canadensis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"ulva expansa","label":"Ulva expansa","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"universal","label":"Universal","imageSrc":"","imageAlt":"","mod":null,"modLink":null,"linkVariable":null},{"value":"vargula hilgendorfii","label":"Vargula hilgendorfii","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"vespula vulgaris","label":"Vespula vulgaris","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"virus","label":"Virus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"watasenia scintillans","label":"Watasenia scintillans","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"wolbachia pipientis","label":"Wolbachia pipientis","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"xenopus","label":"Xenopus","imageSrc":"xenopus.png","imageAlt":"Xenopus graphic by Zoe Zorn CC BY 4.0","mod":"XenBase","modLink":"https://xenbase.org","linkVariable":""},{"value":"xenorhabdus griffiniae","label":"Xenorhabdus griffiniae","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"yramea cytheris","label":"Yramea cytheris","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"zaprionus indianus","label":"Zaprionus indianus","imageSrc":"","imageAlt":"","mod":"","modLink":"","linkVariable":""},{"value":"zea mays","label":"Zea mays","imageSrc":"","imageAlt":"","mod":"MaizeGDB","modLink":"https://www.maizegdb.org","linkVariable":""},{"value":"zebrafish","label":"Zebrafish","imageSrc":"zebrafish.png","imageAlt":"Zebrafish graphic by Zoe Zorn CC BY 4.0","mod":"ZFIN","modLink":"https://zfin.org","linkVariable":""}]}},"pageContext":{"id":"25173ca3-0b64-494e-9b1a-d8de55ed0cfe","citedBy":[],"parsedCsv":{"csvHeader":[],"csvData":[]}}},
    "staticQueryHashes": ["2114697108"]}